AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000001
literal: analysis process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000001
literal: Any act of analysis, broadly construed, of a subject. To include identification, observation, etc.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000002
literal: anatomical entity

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000002
literal: A part of a structural body pattern consistently observed across a class of organisms. For example cell, nucleus, cytoplasm, membrane, stroma, epithelium, liver.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000003
literal: antibody

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000003
literal: A molecule or other chemical species exhibiting reactivity with a specific target antigen. Especially when the antigen presence is temporally prior or naturally occurring, and the antibody presence is naturally-induced (as in an immune response) or is deliberately introduced (as in histological staining).

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000004
literal: assay result

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000004
literal: The empirical claim about a subject supported by an assay analyzing that subject. When the assay type is binary (present or not present), the assay result is just assertion or non-assertion of the claim corresponding to the assay type (for example, an assay for the presence of a specific disease). In this case a common convention for the values is 'positive' or 'negative'.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000005
literal: assay

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000005
literal: A planned process with the objective to produce information about the material entity that is the evaluant, by physically examining it or its proxies.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000006
literal: biological marking system

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000006
literal: An ensemble consisting of an antibody and its target antigen, intended to be used to elicit a specific observable reaction which indicates (marks) antigen presence, often in tissue specimens but also in individual cells or other biospecimens. Developed or selected for use in a given study.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000007
literal: biological species

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000007
literal: A collection of organisms whose members are related by a sequence of tokogenies (ancestry/descent), and for which the collection is maximal subject to the constraint it that does not span any speciation boundaries, i.e. temporal boundaries formed by allopatric, parapatric, or sympatric speciation events (Wheeler and Meier, 'Species Concepts and Phylogenetic Theory'). For example, Homo sapiens (humans), or Mus musculus (mice).

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000008
literal: biospecimen

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000008
literal: A portion (or, more rarely, the whole) of an organism prepared to be an object of study, observation, measurement, or analysis.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000009
literal: biospecimen collection process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000009
literal: A process in which a biospecimen is retrieved from its natural environment or host and placed under control for observation and analysis. Typically the process consists of extraction of a subspecimen from a whole organism, or from another subspecimen, at a specific site, preservation using a specific protocol, and storage together with similar specimens collected as part of a study.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000010
literal: biospecimen collection study

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000010
literal: An effort, generally undertaken by a group of collaborating participants, to collect biospecimens of a particular type for the purpose of eventual observation/measurement and analysis. Typically initiated and concluded at specific times, but may be ongoing.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000011
literal: biospecimen data measurement process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000011
literal: A process in which a biospecimen is subject to measurement of some qualitative or quantitative feature, usually by means of some measurement apparatus, resulting in a data item or data items about the biospecimen.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000012
literal: biospecimen data measurement study

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000012
literal: An effort, generally undertaken by a group of collaborating participants, to make data measurements on a collection of biological specimens. Typically initiated and concluded at specific times, provided that the specimen collection study is complete.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000013
literal: biospecimen event

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000013
literal: An event pertaining to a biospecimen. A time in the duration span of the biospecimen.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000014
literal: biospecimen preservation method

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000014
literal: A method of treatment of a biospecimen intended to preserve the structure and chemical composition which were present at the time immediately prior to extraction.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000015
literal: continuant

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000015
literal: See BFO.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000016
literal: cell phenotype

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000016
literal: An in-principle observable character for a cell. Meant to be inclusive of potentially-transient cell states and more enduring cell types.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000017
literal: cell phenotype criterion

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000017
literal: A criterion which must be satisfied by a cell in order that it acquire the designation of a specific phenotype. Typically a suitable amount of membrane expression of a certain protein or other chemical species. The latter is often a Cluster of Differentiation (CD) protein, especially for immune cell phenotypes. The criteria used (and the phenotypes themselves) may depend on the specific data analysis study undertaken.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000018
literal: chemical species

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000018
literal: A class of chemical objects, or specific mixture of such objects, defined by structural criteria at the molecular length scale. For example, iron, sodium chloride, keratin, or mRNA molecule coded as the BCL2 gene.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000019
literal: chemical species structure class

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000019
literal: A common higher taxon for chemical species, for example mRNA, DNA, protein, lipid, hydrocarbon. Often meant to aid in distinctions between species closely related in an information-theoretic sense, e.g. the distinction between the BCL2 gene's mRNA molecule, DNA segment, or protein product.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000020
literal: condition

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000020
literal: An an-principle empirically diagnosable condition of a subject.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000021
literal: coordinate shape specification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000021
literal: A concrete data artifact representing a specific shape in the standard reference dimensionless coordinate space of a given dimension (the standard Euclidean space). For example, a representation of the unit circle in the coordinate plane, a closed polygon with specific enumerated vertices, or a single point.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000022
literal: data analysis study

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000022
literal: An effort, generally undertaken by a group of collaborating participants, to analyze data measurements.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000023
literal: data file

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000023
literal: A concrete data artifact (byte string) whose contents represent the empirical-evidential component of a claim or claims about a given material entity.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000024
literal: diagnosis assessor

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000024
literal: The person or agent who performs a given diagnosis.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000105
literal: diagnosis result

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000105
literal: The empirical claim about a subject supported by an act of diagnosis (often epistemologically complex and multi-factorial). May be 'positive' or 'negative' for disease presence, or an indication of disease subtype presence (e.g. 'triple-negative' for the disease 'breast cancer').

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000026
literal: diagnostic selection criterion

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000026
literal: A criterion for cohort selection on the basis of a diagnosis result.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000027
literal: discrete value

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000027
literal: An information-theoretic entity representing one from among several pre-defined mutually exclusive values for some property. Often derived from a classification of a quantitative value using thresholds. Often one of two pre-defined values, positive and negative.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000028
literal: diagnosis event

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000028
literal: The concluding event of an assessor's determination of the presence or absence of a specific condition in a subject. Often the determination is made on the basis of consideration of multiple factors.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000029
literal: event date

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000029
literal: The time at which something happens. When represented by a string, the preferred format is ISO 8601-1:2019 (e.g. '1999-04-01' for April 1st in the year 1999), but this can also be represented as a timestamp or even a relative, ordinal value, so long as it is consistent across related records.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000030
literal: evaluation

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000030
literal: Systematic, objective appraisal of the significance, effectiveness, and impact of activities or condition according to specified objectives and criteria.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000031
literal: feature specification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000031
literal: An information content entity using enumerated specifiers to describe one from among several possible feature derivations.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000032
literal: feature specifier

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000032
literal: A specifier that is an enumerated part of some feature specification.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000033
literal: feature derivation method

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000033
literal: The plan for a computational or experimental process that results in associations of quantitative (or, sometimes, qualitative) values to elements of a sample set. Often the associations involve an aggregation over finer-grained samples to a coarsest level of granularity, and are dependent on enumerated specifiers, like an ordered tuple of genes or image channels.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000034
literal: file

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000034
literal: A concrete data artifact consisting of a particular byte string.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000035
literal: file basename

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000035
literal: The basename, i.e. without path information, for a file in some file system. A basename implicitly encoding information about the referents of file contents is not preferred; the SHA256 file hash is a reasonable choice of name convention which eschews implicit information (no SHA256 collisions are currently known).

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000036
literal: file content structure specification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000036
literal: A documented reference specification for a given class of files which provides a way to parse the semantic meaning of specification-compliant files.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000037
literal: file hash sha256

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000037
literal: The SHA256 hash (Secure Hash Algorithm 2, 256-bit digest) of the contents of a given digital file.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000038
literal: file size

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000038
literal: The number of bytes in the byte string contents of a given digital file.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000039
literal: file syntax format

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000039
literal: A class of file content structures delimited by rough structural criteria. Often indicated with a file extension. For example, comma-separated values (CSV).

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000040
literal: histological structure

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000040
literal: An instance of an anatomical entity identifiable in tissue sections. For example, a cell, a stromal region, or a subcellular compartment like a nucleus.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000041
literal: histological structure identification method

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000041
literal: The method by which an annotator identifies or delimits histological structures, instances of an anatomical entity, in a histology slide. For example, manual marking on an image representation of the slide area, or a segmentation algorithm.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000042
literal: histological structure identification process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000042
literal: A specific instance of identification or delimitation of a histological structure in a slide by means of data measurements, e.g. imaging, resulting in a shape specification defined with respect to a plane coordinates reference system.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000043
literal: histology assay

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000043
literal: The assessment (e.g. of a histology slide) for a specific feature. For example, tumor grading.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000044
literal: histology assessment process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000044
literal: A specific instance of performance of an histology assay by an assessor at a specific time.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000045
literal: histology slide

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000045
literal: A biological specimen together with a supporting substrate on which it is mounted. Typically for the purpose of microscopy analysis.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000046
literal: identifier

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000046
literal: A symbol string meant to correspond to exactly one member of a collection. Generally not a linguistic name for verbalization in natural language speech or text.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000047
literal: institution

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000047
literal: An established society, corporation, foundation or other organization founded and united for a specific purpose, e.g. for health-related research.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000048
literal: intervention

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000048
literal: An activity that produces an effect, or that is intended to alter the course of a disease in a patient.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000049
literal: measurement apparatus

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000049
literal: A machine or tool used by an operator to make measurements of specific properties of subjects or specimens.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000050
literal: measurement apparatus software

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000050
literal: Software that runs on a computer linked to a measurement apparatus to control the measurement process or extract data results.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000051
literal: measurement assay

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000051
literal: The plan design for the assessment of a subject or specimen for a specific feature. Usually the feature is quantitative. Usually the feature is also epistemologically elementary, as contrasted with assessments involving extensive reasoned judgement (as in a full-fledged diagnosis).

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000052
literal: method of marker discretization

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000052
literal: The method by which the quantitative values of some property are cast into discrete values. For example, thresholding on the median over a collection.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000053
literal: method of marker quantification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000053
literal: The method by which marker presence is quantified. For example, averaging of raster image intensity values over an image mask.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000054
literal: name

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000054
literal: A symbol string meant to correspond to exactly one member of a collection, and generally also intended to be capable of verbalization in natural language speech or text.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000055
literal: ordinality

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000055
literal: A data value that is an ordinal number, ie., a number that tells the position of something in a list.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000056
literal: phenotypic sex

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000056
literal: The class of reproductive compatibility to which a given organism belongs, in case its biological species admits such classes (gonochoric species). As indicated by observable phenotypic information. For example, male, female, or intersex.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000057
literal: plane coordinates reference system

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000057
literal: A correspondence between a specific two-dimensional material or spatial area (or class of such areas under specific conditions) and the standard two-dimensional coordinate space, in the special case of intrinsically-flat areas and correspondences which preserve distances up to an overall scale. Such a correspondence is determined uniquely by (i) a correspondence between just one reference point on the source and target, (ii) an indication of the direction of the first coordinate axis on the referent, (iii) the choice of one of the two possible directions of the remaining, second coordinate axis direction on the referent, and (iv) a choice of length scale, or unit.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000058
literal: quantification of chemical target expression

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000058
literal: An instance of determination of a quantity representing the amount of a chemical target present in a given specimen or structure, typically by means of a specific chemical marking ensemble rendering this amount as an observable quantity (e.g. immunofluoresence at a specific wavelength).

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000059
literal: quantitative feature derivation process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000059
literal: An instance of quantification of a state or property of a subject which is carried out according to a given feature specification.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000060
literal: specifier

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000060
literal: An identifier meant to be used in a limited context, for disambiguation between highly salient alternatives.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000061
literal: statistical test

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000061
literal: See OBI.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000062
literal: study subject

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000062
literal: A person, other organism, or biospecimen which is the subject of some study.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000063
literal: subspecimen extraction method

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000063
literal: The method by which subspecimens are extracted from a source specimen. For example, fine-needle aspiration.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000064
literal: two-cohort feature association test

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000064
literal: An application of a statistical test for association between a given specified feature on a sample set and assignment to one of two cohorts defined by selection criteria.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000065
literal: unit

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000065
literal: For a 1-dimensional quantifiable/measurable property forming an abstract additive number system, i.e. exhibiting a natural addition operation, a unit is a choice of reference value for the property. Such a choice determines a correspondence between the possible values of the property and the standard 1-dimensional coordinate space, the (dimensionless) real numbers.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000066
literal: investigation

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000066
literal: A planned process that consists of parts: planning, study design execution, documentation and which produce conclusion(s).

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000067
literal: study contact person

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000067
literal: A person who has responsibility for receiving general queries regarding the conduct of a given study.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000068
literal: communication contact reference

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000068
literal: An address for direction of communication, e.g. an email address, a mailing address, or a phone number.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000069
literal: study component

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000069
literal: A relation between a primary study and another study in which the latter is a component or part of the primary study.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000070
literal: publication

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000070
literal: A document, i.e. a collection of information content entities intended to be understood together as a whole, which is the output of a publishing process and which is about an investigation.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000071
literal: publisher

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000071
literal: The institution or organization which performs publication processes resulting in publications, i.e. which receives, accepts, and disseminates the document comprising the publications.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000072
literal: author

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000072
literal: A person who performed a substantial amount of the writing of a given publication, or otherwise performed investigation and related work responsible for the substance of the publication.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000073
literal: author rank

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000073
literal: The position of an author in the rank order of authors advertised by the publisher of a given publication, typically decided by the authors as an indication of level of contribution, but sometimes decided by other means (e.g. alphabetical order on names). Often the author in first position declare responsibility for communication regarding the work.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000074
literal: research professional

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000074
literal: A person who performs research or a service that directly supports a research activity.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000075
literal: personal full name

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000075
literal: A full set of all personal names by which an individual is known and that can be recited as a word-group, with the understanding that, taken together, they all relate to that one individual.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000076
literal: family name

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000076
literal: An identifier that is typically a part of a person's name which has been passed, according to law or custom, from one or both parents to their children.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000077
literal: given name

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000077
literal: A personal name that specifies and differentiates between members of a group of individuals, especially in a family, all of whose members usually share the same family name (surname). A given name is purposefully given, usually by a child's parents at or near birth, in contrast to an inherited one such as a family name.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000078
literal: open researcher and contributor identifier

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000078
literal: A centrally registered identifier that is issued by ORCID (https://orcid.org/) and used to persistently identify oneself as a human researcher or contributor.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000079
literal: has assay performer

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000079
literal: The person or agent who performs a given assay.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000080
literal: has base64 file contents

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000080
literal: The Base64-encoded ASCII character string serialization of the file contents byte string. The encoding is specified by RFC 4648.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000081
literal: has biospecimen age at event

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000081
literal: The amount of time between the inception of a given biospecimen (typically extraction) and the given event. Typically denominated in number of days.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000082
literal: has biospecimen analyzed

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000082
literal: The biospecimen analyzed by an analysis process, in case the subject is a biospecimen.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000083
literal: has biospecimen storage location

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000083
literal: The location of storage of biospecimens during the period after collection but before measurement or analysis.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000084
literal: has cause of death

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000084
literal: The most significant causative factor in the death of a given subject. Often but not always pertinent to the study of which the subject is a part, in the case of disease studies.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000085
literal: has cell phenotype criterion marker

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000085
literal: The chemical species whose presence or absence is the substance of a given cell phenotype criterion.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000086
literal: has cell phenotype criterion polarity

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000086
literal: The value (typically positive or negative) stipulated by a given cell phenotype criterion.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000087
literal: has cell phenotype symbol

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000087
literal: A symbol string, not necessarily intended for verbalization in long-form speech or text, meant to summarize the intended meaning of a given cell phenotype. This is potentially an abbreviation of the full name.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000088
literal: has chemical species quantified

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000088
literal: The chemical species which is quantified by a given process.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000089
literal: has chemical species symbol

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000089
literal: A symbol string representation of the chemical species, or possibly a gene class of closely-related species (for example, BCL2 for a certain DNA segment, the corresponding mRNA molecule, and the corresponding protein product).

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000090
literal: has component study

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000090
literal: The component study of the component relation.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000091
literal: has condition considered

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000091
literal: The condition considered during a process of diagnosis.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000092
literal: has coordinate system orientation specification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000092
literal: The description of the direction, on the object or area of interest, intended to correspond to the first coordinate positive axis, plus a description of the choice of which of the two orthogonal directions is intended to correspond to the second coordinate positive axis.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000093
literal: has coordinate system reference point

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000093
literal: The description of a single point, on the object or area of focus, which serves as a reference point for establishing an orthogonal (Euclidean similarity) coordinate system.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000094
literal: has coordinate system reference point 1

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000094
literal: The intended first coordinate value of the coordinate-space point corresponding to the reference point. For orthogonal (Euclidean similarity) coordinate systems.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000095
literal: has coordinate system reference point 2

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000095
literal: The intended second coordinate value of the coordinate-space point corresponding to the reference point. For orthogonal (Euclidean similarity) coordinate systems.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000096
literal: has coordinate system unit

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000096
literal: A representation (e.g. 10 micrometers) of the length unit intended to correspond to the displacement in the coordinate space by the value 1. For orthogonal (Euclidean similarity) coordinate systems.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000097
literal: has data file generation source process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000097
literal: The measurement process which produced a given data file.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000098
literal: has date of birth

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000098
literal: The date of inception, in the case of a biological subject.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000099
literal: has date of conclusion

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000099
literal: The final date of the continuant's existence.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000100
literal: has date of death

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000100
literal: The date of conclusion, in the case of a biological subject.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000101
literal: has date of diagnosis

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000101
literal: The date on which a diagnosis was made.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000102
literal: has date of inception

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000102
literal: The initial date of the continuant's existence.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000103
literal: has date of intervention

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000103
literal: The date that a specific intervention was performed.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000104
literal: has date of publication

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000104
literal: The date on which the publication process was completed.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000105
literal: has diagnosis result

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000105
literal: The empirical claim about a subject supported by an act of diagnosis (often epistemologically complex and multi-factorial). May be 'positive' or 'negative' for disease presence, or an indication of disease subtype presence (e.g. 'triple-negative' for the disease 'breast cancer').

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000106
literal: has document structure class

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000106
literal: See IAO.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000107
literal: has extracted subspecimen

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000107
literal: The subspecimen extracted during a given biospecimen collection process.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000108
literal: has expression quantity

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000108
literal: A real (dimensionless) numerical value representing an amount with respect to some unit.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000109
literal: has feature subject

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000109
literal: The entity that was subjected to the feature derivation or quantification process.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000110
literal: has feature value

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000110
literal: The quantity resulting from the quantification process.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000111
literal: has histological structure identification performer

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000111
literal: The person who identified a histological structure or operated software making such an identification.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000112
literal: has institution of activity

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000112
literal: The primary institution in which the investigation is carried out, which provides resources for the investigation, or which directs the conduct of the investigation.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000113
literal: has internet reference

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000113
literal: A reference, typically a URL and often a DOI-formatted URL, that is issued by the publisher and refers to an at least partial digital representation of the publication.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000114
literal: has marking antibody

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000114
literal: The antibody used in the given marker/staining system.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000115
literal: has maximal date of evidence

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000115
literal: For an evaluation of activity or condition based on evidential factors of consideration, the most recent known date of creation of the evidence. If this date is accurately known, events after this date cannot bias the evaluation. For example, for a diagnosis based on a blood sample, X-rays, and a biopsy, if the blood sample was taken last, then the date of this sample is the maximal date of evidence.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000116
literal: has mechanism of target marking

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000116
literal: The mechanism by which the given marker system renders the target antigen observable.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000117
literal: has primary study

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000117
literal: The primary study of the component relation.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000118
literal: has shape specification file format

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000118
literal: The documented file format for a given shape specification file.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000119
literal: has source biospecimen

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000119
literal: The biospecimen from which a subspecimen was extracted during the given specimen collection process.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000120
literal: has specification of quantified feature

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000120
literal: The specification for feature derivation which was used to carry out a given instance of quantification.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000121
literal: has study specifier

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000121
literal: A short name for the study meant mainly for human-readable reference which disambiguates against other studies in the context of a single database instance.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000122
literal: has subject of quantification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000122
literal: The histological structure which is the domain for the given expression quantification process.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000123
literal: has subspecimen extraction site

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000123
literal: The location on the source specimen from which a subspecimen is extracted.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000124
literal: has test probability value

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000124
literal: See OBI.

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000125
literal: has analysis process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000126
literal: has anatomical entity

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000127
literal: has antibody

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000128
literal: has assay result

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000129
literal: has assay

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000130
literal: has biological marking system

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000131
literal: has biological species

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000132
literal: has biospecimen

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000133
literal: has biospecimen collection process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000134
literal: has biospecimen collection study

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000135
literal: has biospecimen data measurement process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000136
literal: has biospecimen data measurement study

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000137
literal: has biospecimen event

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000138
literal: has biospecimen preservation method

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000139
literal: has continuant

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000140
literal: has cell phenotype

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000141
literal: has cell phenotype criterion

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000142
literal: has chemical species

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000143
literal: has chemical species structure class

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000144
literal: has condition

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000145
literal: has coordinate shape specification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000146
literal: has data analysis study

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000147
literal: has data file

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000148
literal: has diagnosis assessor

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000149
literal: has diagnosis result

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000150
literal: has diagnostic selection criterion

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000151
literal: has discrete value

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000152
literal: has diagnosis event

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000153
literal: has event date

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000154
literal: has evaluation

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000155
literal: has feature specification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000156
literal: has feature specifier

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000157
literal: has feature derivation method

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000158
literal: has file

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000159
literal: has file basename

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000160
literal: has file content structure specification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000161
literal: has file hash sha256

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000162
literal: has file size

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000163
literal: has file syntax format

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000164
literal: has histological structure

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000165
literal: has histological structure identification method

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000166
literal: has histological structure identification process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000167
literal: has histology assay

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000168
literal: has histology assessment process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000169
literal: has histology slide

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000170
literal: has identifier

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000171
literal: has institution

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000172
literal: has intervention

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000173
literal: has measurement apparatus

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000174
literal: has measurement apparatus software

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000175
literal: has measurement assay

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000176
literal: has method of marker discretization

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000177
literal: has method of marker quantification

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000178
literal: has name

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000179
literal: has ordinality

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000180
literal: has phenotypic sex

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000181
literal: has plane coordinates reference system

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000182
literal: has quantification of chemical target expression

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000183
literal: has quantitative feature derivation process

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000184
literal: has specifier

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000185
literal: has statistical test

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000186
literal: has study subject

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000187
literal: has subspecimen extraction method

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000188
literal: has two-cohort feature association test

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000189
literal: has unit

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000190
literal: has investigation

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000191
literal: has study contact person

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000192
literal: has communication contact reference

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000193
literal: has study component

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000194
literal: has publication

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000195
literal: has publisher

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000196
literal: has author

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000197
literal: has author rank

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000198
literal: has research professional

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000199
literal: has personal full name

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000200
literal: has family name

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000201
literal: has given name

AnnotationAssertion
IRI: http://adiframework.com/owl/scstudies#0000202
literal: has open researcher and contributor identifier